Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835483.1_cds_XP_016505952.1_19232
CDS Infomation

[gene=LOC107823761] [db_xref=GeneID:107823761] [protein=U3 small nucleolar RNA-associated protein 6 homolog] [protein_id=XP_016505952.1] [location=join(26249..26644,27977..28633,29310..29765,30718..30890,31470..31653,32159..32245)] [gbkey=CDS]
Sequence

ATGGCGGATGTGGTACAGTACAAGATGGAGCGAATGCTCCCTGAGCTAGACGACTTAGAA
CGGCGTGGCTTATTCAGCCGCCATGAAATAGCGGAAATAGTTAAACAACGACGTAAATTC
GAGTACAGGCTAAAGAGACCTAGTCCGTTAAAGCAGGATTTTGTTGCTTATATTGATTAT
GAGAAAAGTCTAGATGCTCTTCGACTTCTACGTAAGAAAGCTCAGATGAAGAAAATGGGC
GATAGGAAGGTGAAGAAATCGGTTTCGGATTATGCTGGAGTTTCTAGGATTATTGAGATT
TATCGGCTTGCGACGAGTAGGTTTAAGGGAGACATAGAGCTTTGGTTTCAGTATTTGGAG
TTTTGTAGGCAGCGAAGGAATGGTCGAATGAAGAAGGCCCTGGCGCAGGCAATTAGGTTT
CACCCTAAGGTGCCTGGAGTTTGGATATATGCTGCAGCTTGGGAATTTGACAACAACTTA
AATGCTGCTGCTGCTCGTGCCCTGATGCATAGTGGCTTGAGAGCATGTCCAACTTCTGAG
GATCTGTGGGTAGAATATCTACGGATGGAGCTTACATACCTAAATAAATTAAAGGCTCGC
AAAGTCGTGCTAGGAGAAGATGAGGGAACACTGGCTCGTTCTGGCAAAAATGCTAAAGAG
GAACAGTGGAGAGATGAGAACAAGGAATTATTTATGGCCCTTGATGATAAAAGAGAGGAT
GACAAATTATCCAACCTTCACGAAGGAGACCCGAAGGAAAAAGTAGATTTATTTAGGGAA
CAAGGTTTAAGTGTTCTTCAGACAGTTTACAGTGGTTCTATTAAAGCCCTCCCTTCCAGT
TTCAGTTTAAGAACACAGTTTCTTGAGATACTTGCAGCAACGGATTTAGCTCATTCAGAA
GATATGCGAAATGAGATACTTGCTGATATGAAACGGGACTTTTCAGAAGAACCAAAATAT
TGGGATTGGCTTGCAAGACAGGAAGTCATTGATCTTAGTAATCCAGAGAGTACTGAAGCA
ATGACAGCTGATCAGTTAAGCACAGCAATTCAGGTTTATGAGGAGGGTTTAAAATTTGTG
CCTTCAGCCTCAATGTTTGATTGTTATGTGAAGTTCTTGATGAATGTCATTCATTTTAGA
AATCAGAGCAGTCAATCTTCTGAGCACTTTGGCGCATCTAGTCATGCCATGGATCCTGTT
TCACATCTCCTGGTAGTATTTGAAAAGGCTGAAACAATGGGGTGCATCACAGAGGATCTT
GCTTGTCAGCATGTTTCTTTTCTATTGCAACTTGGGAAAGTAGATGAAGCTAAGACTTTG
GCGGAGAAATTGTGTTCTGGAAAATTTTCAGAAGCAGTGCAGCTATGGGCTTTACGGCTC
TCGGTGGAAATGAGACTTATCCAGAAGAACTGCACTCCAAATAAGGCAGTTCTGTCTTCT
GTCTTTGAACTCATGAGAAATGTTTTAGCGAAAGCTCCCGTATCAGAGGCAGAAACTATA
TGGCTTATGGCGCTCAAATATTTCTCCACTCATAAACAGTTGTTTGACAAGTTAATCAAG
ACTTCTATGACTTTACTGGCCAAAGATGGTGGAAGTGATGATGGATTTTCCCTCTCTTCT
GCCATCGTCAATTTTGTTCTGCAAAGGGATGGGCTTGGGAGTGCTAGAGAGTTATATAAG
AGATTTCTTGCTTTACCGCATCCAGGACTTTCCTTATATAGAAATTGCATTGAGCTGGAA
TTGAACCTTGCATCTAGTGGAGATAAGATTAGTCTCGGAAATGCCCGGAAATTGTATGAT
ACTGCGCTTACAACTTATGATCAAGATACCGGATTGTGGCGAGACTATTATCATATGGAA
CTTCAGATGGGAACATCAGAAACTGCAGCAGCCGTTCACTGGCGAGCACGGAAAACACTC
AAGGCGAATATTTCCCTTCTACCCTCACAATGA

Peptide Sequence

PEP ID

XP_016505952.1
PEP Infomation

PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Nicotiana tabacum]
Sequence

MADVVQYKMERMLPELDDLERRGLFSRHEIAEIVKQRRKFEYRLKRPSPLKQDFVAYIDY
EKSLDALRLLRKKAQMKKMGDRKVKKSVSDYAGVSRIIEIYRLATSRFKGDIELWFQYLE
FCRQRRNGRMKKALAQAIRFHPKVPGVWIYAAAWEFDNNLNAAAARALMHSGLRACPTSE
DLWVEYLRMELTYLNKLKARKVVLGEDEGTLARSGKNAKEEQWRDENKELFMALDDKRED
DKLSNLHEGDPKEKVDLFREQGLSVLQTVYSGSIKALPSSFSLRTQFLEILAATDLAHSE
DMRNEILADMKRDFSEEPKYWDWLARQEVIDLSNPESTEAMTADQLSTAIQVYEEGLKFV
PSASMFDCYVKFLMNVIHFRNQSSQSSEHFGASSHAMDPVSHLLVVFEKAETMGCITEDL
ACQHVSFLLQLGKVDEAKTLAEKLCSGKFSEAVQLWALRLSVEMRLIQKNCTPNKAVLSS
VFELMRNVLAKAPVSEAETIWLMALKYFSTHKQLFDKLIKTSMTLLAKDGGSDDGFSLSS
AIVNFVLQRDGLGSARELYKRFLALPHPGLSLYRNCIELELNLASSGDKISLGNARKLYD
TALTTYDQDTGLWRDYYHMELQMGTSETAAAVHWRARKTLKANISLLPSQ

Transcript Sequence

Gene sequence data has not been registered.